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HTTP/1.1 200 OKVary: Accept-EncodingContent-Type: text/html; charsetUTF-8Strict-Transport-Security: max-age31536000; includeSubDomains; preloadDate: Sun, 23 Nov 2025 07:14:16 GMTX-XSS-Protection: 1; modeblockX-Olaf: ⛄Accept-Ranges: bytesX-Content-Type-Options: nosniffLast-Modified: Thu, 07 Aug 2025 09:05:04 GMTX-UA-Compatible: IEedgeX-Frame-Options: SAMEORIGINReferrer-Policy: strict-origin-when-cross-originX-Clacks-Overhead: GNU Terry PratchettContent-Length: 7655

!doctype html>html xmlnshttp://www.w3.org/1999/xhtml langlangen-US>  head>    title>Home page - Malaria Cell Atlas/title>    meta charsetUTF-8>    meta nameviewport contentwidthdevice-width, initial-scale1>    link relpreconnect hrefhttps://fonts.gstatic.com/>    link relshortcut icon typeimage/png href/wp-content/themes/malaria_cell_atlas//dist/assets/gfx/mca-ico.png/>    meta namedescription          contentThe Malaria Cell Atlas is an active project led by the Lawniczak lab to provide an interactive data resource of single cell transcriptomic data across the full lifecycle of malaria parasites. />    meta nametwitter:card         contentsummary_large_image>    meta nametwitter:site         content@sangerinstitute>    meta nametwitter:creator      contentwww-core (Sanger webteam)>    meta nametwitter:title        contentHome page - Malaria Cell Atlas>    meta nametwitter:description  contentThe Malaria Cell Atlas is an active project led by the Lawniczak lab to provide an interactive data resource of single cell transcriptomic data across the full lifecycle of malaria parasites. />    meta nametwitter:image        content/wp-content/themes/malaria_cell_atlas//dist/assets/gfx/mca-og.png>    meta propertyog:url           contenthttps://www.malariacellatalas.org/>    meta propertyog:type          contentarticle />    meta propertyog:title         contentHome page - Malaria Cell Atlas />    meta propertyog:description   contentThe Malaria Cell Atlas is an active project led by the Lawniczak lab to provide an interactive data resource of single cell transcriptomic data across the full lifecycle of malaria parasites. />    meta propertyog:image         content/wp-content/themes/malaria_cell_atlas//dist/assets/gfx/mca-og.png>    meta propertyog:locale        contenten_GB />    meta propertyog:profile_id    contentsangerinstitute />    meta namerobots contentmax-image-preview:large />    	style>img:is(sizesauto i, sizes^auto, i) { contain-intrinsic-size: 3000px 1500px }/style>    	link relstylesheet idsimple-cookie-css href/wp-content/plugins/wordpress-simple-cookie-plugin/cookies-min.css media />    link relstylesheet idtheme-style-css href/wp-content/themes/malaria_cell_atlas/dist/assets/css/style.css media />    link relcanonical hrefhttps://www.malariacellatlas.org/ />    meta namesimplecookie_policy  content/cookie-policy/ />    meta namesimplecookie_types   contente1 t1 />  /head>  body idhomepage>    header>div>      div>a href/>img alt* Malaria Cell Atlas Logo src/wp-content/themes/malaria_cell_atlas//dist/assets/gfx/logo-600.png>/a>/div>      h1>a href/>strong>M/strong>alaria strong>C/strong>ell strong>A/strong>tlas/a>/h1>      nav idtop>a href/>Home/a> | a href/data-sets/>Data sets/a>/nav>    /div>/header>main>      section classatlas-links>        div>img src/wp-content/themes/malaria_cell_atlas//dist/assets/gfx/mca-homepage-v2.jpg altMalaria life cycle />/div>        div>          span>Explore the data/span>          a href/atlas/pf/>i>Plasmodium falciparum/i>/a>          a href/atlas/pb/>i>Plasmodium berghei/i>/a>          a href/atlas/pk/>i>Plasmodium knowlesi/i>/a>          a href/atlas/po/>i>Plasmodium ovale/i>/a>          a href/atlas/pm/>i>Plasmodium malariae/i>/a>        /div>      /section>      section classintro>        p>The Malaria Cell Atlas is an active project led by the a hrefhttps://www.sanger.ac.uk/group/lawniczak-group/>Lawniczak lab/a> to provide an interactive data resource of single cell transcriptomic data across the full lifecycle of malaria parasites./p>p>The MCA includes data from multiple collaborative projects, and more are in the works. Users can explore how genes are expressed over thousands of individual parasites from several different i>Plasmodium/i> species and across all life stages./p>p>We aim for the Malaria Cell Atlas to be beneficial to all malaria researchers, from those focused on particular gene families, to those developing novel drugs and vaccines. If you have suggestions for improvement, please get in touch at a hrefhttps://mca.curtissmith.me.uk/malariacellatlas@sanger.ac.uk>malariacellatlas@sanger.ac.uk/a>./p>p>Click on the buttons above to explore the species specific Atlases. Individual datasets, their associated papers where relevant, and their interactive views can be accessed here at a href/data-sets/>All Datasets/a>, as well as a number of other datasets generated but not incorporated into the Atlases./p>      /section>      section classdata-sets>p>strong>span stylecolor: #d22b2b;>NEW DATASETS/span>/strong>: Our recent study published in a hrefhttps://www.science.org/doi/10.1126/science.adj4088>Science/a>, includes over 38,000 cells representing asexual and sexual blood stages of NF54 and 7G8 strains of em>Plasmodium falciparum /em>and ~8000 parasites sampled from four natural malaria carriers from Mali./p>p>img loadinglazy decodingasync srchttps://malariacellatlas.edit.sanger.ac.uk/wp-content/uploads/MCAMS-300x144.png alt width450 height216 />/p>blockquote>p styletext-align: left;>Explore the new datasets at:/p>ul>li styletext-align: left;>a href/atlas/plasmodium-falciparum-atlas/>Lab strains, sexual and asexual IDC >/a>/li>li styletext-align: left;>a href/data_set/p-falciparum-10x-natural-infections/>Natural infections >/a>/li>li styletext-align: left;>a href/data_set/p-falciparum-10x-integrated-lab-strains-and-four-natural-infections/>Lab dataset integrated with four natural infections >/a>/li>/ul>/blockquote>/section>      section classsupporters>        a hrefhttps://www.sanger.ac.uk/    >img titleWellcome Sanger Institute altWellcome Sanger Institute src/wp-content/themes/malaria_cell_atlas//dist/assets/gfx/wtsi.svg     />/a>        a hrefhttps://wellcome.org/        >img titleWellcome                  altWellcome                  src/wp-content/themes/malaria_cell_atlas//dist/assets/gfx/wellcome.svg />/a>        a hrefhttps://https://mrc.ukri.org/>img titleMedical Research Council  altMedical Research Council  src/wp-content/themes/malaria_cell_atlas//dist/assets/gfx/mrc.svg      />/a>      /section>      /main>    footer>      div>        p>This site is hosted by the a hrefhttps://www.sanger.ac.uk/>Wellcome Sanger Institute/a>/p>        p>a href/cookie-policy/>Cookies policy/a> | a href/privacy-policy/>Privacy policy/a> | Contact: a hrefmailto:malariacellatlas@sanger.ac.uk>malariacellatlas@sanger.ac.uk/a>./p>      /div>    /footer>    script typespeculationrules>    {prefetch:{source:document,where:{and:{href_matches:\/*},{not:{href_matches:\/wp-*.php,\/wp-admin\/*,\/wp-content\/uploads\/*,\/wp-content\/*,\/wp-content\/plugins\/*,\/wp-content\/themes\/malaria_cell_atlas\/*,\/*\\?(.+)}},{not:{selector_matches:arel~\nofollow\}},{not:{selector_matches:.no-prefetch, .no-prefetch a}}},eagerness:conservative}}    /script>    script src/wp-content/plugins/wordpress-simple-cookie-plugin/cookies-gcc.js idsimple-cookie-js>/script>    script src/zxtm/piwik2.js>/script>  /body>/html>

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